cytoflowgui.workflow.operations.density#

class cytoflowgui.workflow.operations.density.DensityGateWorkflowOp[source]#

Bases: WorkflowOperation, DensityGateOp

default_view(**kwargs)[source]#

Returns a diagnostic plot of the Gaussian mixture model.

Returns:: a diagnostic view, call DensityGateView.plot to see the diagnostic plot.
Return type:: IView

clear_estimate()[source]#

apply(experiment)[source]#

Creates a new condition based on membership in the gate that was parameterized with estimate.

Parameters:: experiment (Experiment) – the Experiment to apply the gate to.
Returns:: a new Experiment with the new gate applied.
Return type:: Experiment

get_notebook_code(idx)[source]#

class cytoflowgui.workflow.operations.density.DensityGateWorkflowView[source]#

Bases: WorkflowByView, DensityGateView

should_plot(changed, payload)[source]#

Should the owning WorkflowItem refresh the plot when certain things change? changed can be: - Changed.VIEW – the view’s parameters changed - Changed.RESULT – this WorkflowItem’s result changed - Changed.PREV_RESULT – the previous WorkflowItem’s result changed - Changed.ESTIMATE_RESULT – the results of calling “estimate” changed

If should_plot is called from a notification handler, the payload is the handler event parameter.

get_notebook_code(idx)[source]#