cytoflowgui.workflow package#
cytoflowgui.workflow#
- class cytoflowgui.workflow.Changed[source]#
Bases:
object- APPLY = 'APPLY'#
- ESTIMATE = 'ESTIMATE'#
- VIEW = 'VIEW'#
- ESTIMATE_RESULT = 'ESTIMATE_RESULT'#
- OP_STATUS = 'OP_STATUS'#
- RESULT = 'RESULT'#
- PREV_RESULT = 'PREV_RESULT'#
Subpackages#
- cytoflowgui.workflow.operations package
- cytoflowgui.workflow.operations
- Submodules
- cytoflowgui.workflow.operations.autofluorescence
AutofluorescenceWorkflowOpAutofluorescenceWorkflowView- cytoflowgui.workflow.operations.bead_calibration
UnitBeadCalibrationWorkflowOpBeadCalibrationWorkflowView- cytoflowgui.workflow.operations.binning
BinningWorkflowOpBinningWorkflowView- cytoflowgui.workflow.operations.bleedthrough_linear
ChannelSpilloverBleedthroughLinearWorkflowOpBleedthroughLinearWorkflowViewCategoryOpSubsetCategoryWorkflowOp- cytoflowgui.workflow.operations.channel_stat
mean_95ci()geomean_95ci()ChannelStatisticWorkflowOp- cytoflowgui.workflow.operations.color_translation
ControlColorTranslationWorkflowOpColorTranslationWorkflowView- cytoflowgui.workflow.operations.density
DensityGateWorkflowOpDensityGateWorkflowView- cytoflowgui.workflow.operations.flowclean
ChannelFlowCleanWorkflowOpFlowCleanWorkflowView- cytoflowgui.workflow.operations.flowpeaks
FlowPeaksWorkflowOpFlowPeaksWorkflowView- cytoflowgui.workflow.operations.gaussian_1d
GaussianMixture1DWorkflowOpGaussianMixture1DWorkflowView- cytoflowgui.workflow.operations.gaussian_2d
GaussianMixture2DWorkflowOpGaussianMixture2DWorkflowViewHierarchyGateHierarchyWorkflowOp- cytoflowgui.workflow.operations.import_op
ValidPythonIdentifierChannelImportWorkflowOp- cytoflowgui.workflow.operations.kmeans
KMeansWorkflowOpKMeansWorkflowView- cytoflowgui.workflow.operations.merge_stat
MergeStatisticsWorkflowOp- cytoflowgui.workflow.operations.mst
MSTWorkflowSelectionViewMSTWorkflowOp- cytoflowgui.workflow.operations.multi_channel_stat
FunctionMultiChannelStatisticWorkflowOp- cytoflowgui.workflow.operations.operation_base
IWorkflowOperationWorkflowOperation- cytoflowgui.workflow.operations.pca
ChannelPCAWorkflowOp- cytoflowgui.workflow.operations.polygon
PolygonPlotParamsScatterplotPolygonSelectionWorkflowViewDensityPolygonSelectionWorkflowViewPolygonSelectionViewPolygonWorkflowOp- cytoflowgui.workflow.operations.quad
QuadSelectionViewQuadWorkflowOp- cytoflowgui.workflow.operations.range
RangeSelectionViewRangeWorkflowOp- cytoflowgui.workflow.operations.range2d
Range2DPlotParamsScatterPlotRangeSelection2DWorkflowViewDensityRangeSelection2DWorkflowViewRange2DSelectionViewRange2DWorkflowOp- cytoflowgui.workflow.operations.ratio
RatioWorkflowOp- cytoflowgui.workflow.operations.register
ChannelRegistrationWorkflowOpRegistrationDiagnosticWorkflowView- cytoflowgui.workflow.operations.som
ChannelSOMWorkflowViewSOMWorkflowOp- cytoflowgui.workflow.operations.tasbe
BleedthroughControlTranslationControlBeadUnitProgressTasbeWorkflowOpTasbeWorkflowView- cytoflowgui.workflow.operations.threshold
ThresholdSelectionViewThresholdWorkflowOp- cytoflowgui.workflow.operations.tsne
ChanneltSNEWorkflowOp- cytoflowgui.workflow.operations.xform_stat
mean_95ci()geomean_95ci()TransformStatisticWorkflowOp
- cytoflowgui.workflow.views package
- cytoflowgui.workflow.views
- Submodules
- cytoflowgui.workflow.views.bar_chart
BarChartPlotParamsBarChartWorkflowView- cytoflowgui.workflow.views.density
DensityPlotParamsDensityWorkflowView- cytoflowgui.workflow.views.export_fcs
ExportFCSWorkflowView- cytoflowgui.workflow.views.histogram
HistogramPlotParamsHistogramWorkflowView- cytoflowgui.workflow.views.histogram_2d
Histogram2DPlotParamsHistogram2DWorkflowView- cytoflowgui.workflow.views.kde_1d
Kde1DPlotParamsKde1DWorkflowView- cytoflowgui.workflow.views.kde_2d
Kde2DPlotParamsKde2DWorkflowView- cytoflowgui.workflow.views.long_table
LongTableWorkflowView- cytoflowgui.workflow.views.matrix
MatrixPlotParamsMatrixWorkflowView- cytoflowgui.workflow.views.mst
MSTPlotParamsMSTWorkflowView- cytoflowgui.workflow.views.parallel_coords
ParallelCoordinatesPlotParamsParallelCoordinatesWorkflowView- cytoflowgui.workflow.views.radviz
RadvizPlotParamsChannelRadvizWorkflowView- cytoflowgui.workflow.views.scatterplot
ScatterplotPlotParamsScatterplotWorkflowView- cytoflowgui.workflow.views.stats_1d
Stats1DPlotParamsStats1DWorkflowView- cytoflowgui.workflow.views.stats_2d
Stats2DPlotParamsStats2DWorkflowView- cytoflowgui.workflow.views.table
TableWorkflowView- cytoflowgui.workflow.views.view_base
IWorkflowViewWorkflowViewWorkflowFacetViewWorkflowByViewBasePlotParamsDataPlotParamsData1DPlotParamsData2DPlotParamsStats1DPlotParamsStats2DPlotParamsChannel- cytoflowgui.workflow.views.violin
ViolinPlotParamsViolinPlotWorkflowView
Submodules#
- cytoflowgui.workflow.serialization
load_yaml()save_yaml()traits_eq()traits_hash()traits_repr()cytoflow_class_repr()traits_str()- cytoflowgui.workflow.subset
ISubsetBoolSubsetCategorySubsetRangeSubset- cytoflowgui.workflow.workflow
MsgUniquePriorityQueuefilter_unpicklable()LocalWorkflowLocalWorkflow.workflowLocalWorkflow.selectedLocalWorkflow.modifiedLocalWorkflow.message_qLocalWorkflow.recv_threadLocalWorkflow.send_threadLocalWorkflow.recv_main()LocalWorkflow.send_main()LocalWorkflow.run_all()LocalWorkflow.remote_eval()LocalWorkflow.remote_exec()LocalWorkflow.wi_sync()LocalWorkflow.wi_waitfor()LocalWorkflow.shutdown_remote_process()
RemoteWorkflowRemoteWorkflow.workflowRemoteWorkflow.selectedRemoteWorkflow.last_view_plottedRemoteWorkflow.send_threadRemoteWorkflow.recv_threadRemoteWorkflow.message_qRemoteWorkflow.matplotlib_eventsRemoteWorkflow.plot_lockRemoteWorkflow.run()RemoteWorkflow.recv_main()RemoteWorkflow.send_main()RemoteWorkflow.shutdown()
- cytoflowgui.workflow.workflow_item
WorkflowItemWorkflowItem.friendly_idWorkflowItem.nameWorkflowItem.operationWorkflowItem.viewsWorkflowItem.current_viewWorkflowItem.resultWorkflowItem.channelsWorkflowItem.conditionsWorkflowItem.metadataWorkflowItem.statisticsWorkflowItem.default_viewWorkflowItem.previous_wiWorkflowItem.next_wiWorkflowItem.workflowWorkflowItem.statusWorkflowItem.op_errorWorkflowItem.op_error_traitWorkflowItem.op_warningWorkflowItem.op_warning_traitWorkflowItem.estimate_errorWorkflowItem.estimate_warningWorkflowItem.view_errorWorkflowItem.view_error_traitWorkflowItem.view_warningWorkflowItem.view_warning_traitWorkflowItem.plot_namesWorkflowItem.plot_names_labelWorkflowItem.matplotlib_eventsWorkflowItem.plot_lockWorkflowItem.lockWorkflowItem.edit_traits()WorkflowItem.trait_view()WorkflowItem.estimate()WorkflowItem.apply()WorkflowItem.plot()