cytoflowgui.view_plugins.radviz

Plots a radviz plot. Radviz plots project multivariate plots into two dimensions. Good for looking for clusters.

Channels

The channels to plot, and their scales. Drag the blue dot to re-order.

Add Channel, Remove Channel

Add or remove a channel

Horizonal Facet

Make multiple plots. Each column has a unique value of this variable.

Vertical Facet

Make multiple plots. Each row has a unique value of this variable.

Color Facet

Plot different values of a condition with different colors.

Color Scale

Scale the color palette and the color bar

Tab Facet

Make multiple plots in differen tabs; each tab’s plot has a unique value of this variable.

Subset

Plot only a subset of the data in the experiment.

../../_images/cytoflowgui-view_plugins-radviz-1.png
class cytoflowgui.view_plugins.radviz.RadvizParamsHandler(*args: Any, **kwargs: Any)[source]

Bases: traitsui.api.Controller

class cytoflowgui.view_plugins.radviz.ChannelHandler(*args: Any, **kwargs: Any)[source]

Bases: traitsui.api.Controller

class cytoflowgui.view_plugins.radviz.RadvizHandler(*args: Any, **kwargs: Any)[source]

Bases: cytoflowgui.view_plugins.view_plugin_base.ViewHandler

add_channel

alias of traits.trait_types.Event

remove_channel

alias of traits.trait_types.Event

channels = <traits.traits.ForwardProperty object>
class cytoflowgui.view_plugins.radviz.RadvizPlugin[source]

Bases: envisage.plugin.Plugin, cytoflowgui.view_plugins.view_plugin_base.PluginHelpMixin

view_id = 'edu.mit.synbio.cytoflow.view.radviz'
short_name = 'Radviz Plot'
get_view()[source]
get_handler(model, context)[source]
get_icon()[source]