cytoflowgui.op_plugins.quad

Draw a “quadrant” gate. To create a new gate, just click where you’d like the intersection to be. Creates a new metadata column named name, with values name_1 (upper-left quadrant), name_2 (upper-right), name_3 (lower-left), and name_4 (lower-right).

Note

This matches the order of FACSDiva quad gates.

Name

The operation name. Used to name the new metadata field that’s created by this operation.

X channel

The name of the channel on the X axis.

X threshold

The threshold in the X channel.

Y channel

The name of the channel on the Y axis.

Y threshold

The threshold in the Y channel.

X Scale

The scale of the X axis for the interactive plot.

Y Scale

The scale of the Y axis for the interactive plot

Hue facet

Show different experimental conditions in different colors.

Subset

Show only a subset of the data.

class cytoflowgui.op_plugins.quad.QuadHandler(*args: Any, **kwargs: Any)

Bases: traitsui.api.

class cytoflowgui.op_plugins.quad.QuadViewHandler(*args: Any, **kwargs: Any)

Bases: traitsui.api.

class cytoflowgui.op_plugins.quad.QuadPlugin

Bases: envisage.plugin.Plugin, cytoflowgui.op_plugins.op_plugin_base.PluginHelpMixin

operation_id = 'edu.mit.synbio.cytoflow.operations.quad'

view_id = 'edu.mit.synbio.cytoflow.views.quad'

short_name = 'Quad'

menu_group = 'Gates'

get_operation()

get_handler(model, context)

get_icon()