#!/usr/bin/env python3.8
# coding: latin-1
# (c) Massachusetts Institute of Technology 2015-2018
# (c) Brian Teague 2018-2022
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
"""
cytoflow.scripts.fcs_metadata
-----------------------------
Return the FCS metadata (in key : value format) for a given FCS file.
"""
import argparse
from fcsparser import fcsparser
[docs]def main():
parser = argparse.ArgumentParser()
parser.add_argument("fcs_file", help = "FCS file to analyze")
args = parser.parse_args()
tube_meta = fcsparser.parse(args.fcs_file, meta_data_only = True)
tube_meta = [(k, v) for k, v in tube_meta.items()]
tube_meta = sorted(tube_meta)
for k, v in tube_meta:
print("{} : {}".format(k, v))
if __name__ == '__main__':
main()