cytoflowgui.workflow.operations.import_op

class cytoflowgui.workflow.operations.import_op.ValidPythonIdentifier(default_value=<traits.trait_type._NoDefaultSpecifiedType object>, **metadata)

Bases: traits.trait_types.BaseCStr

info_text = 'a valid python identifier'

A description of the type of value this trait accepts:

validate(obj, name, value)

Validates that a specified value is valid for this trait.

Note: The ‘fast validator’ version performs this check in C.

class cytoflowgui.workflow.operations.import_op.Channel

Bases: traits.has_traits.HasTraits

class cytoflowgui.workflow.operations.import_op.ImportWorkflowOp

Bases: cytoflowgui.workflow.operations.operation_base.WorkflowOperation, cytoflow.operations.import_op.ImportOp

reset_channels()

estimate(_)

apply(*args, **kwargs)

Load a new Experiment.

Parameters

• experiment (Experiment) – Ignored

• metadata_only (bool (default = False)) – Only “import” the metadata, creating an Experiment with all the expected metadata and structure but 0 events.

Returns

The new Experiment. New channels have the following metadata:

• voltage - int

  The voltage that this channel was collected at. Determined by the $PnV field from the first FCS file.

• range - int

  The maximum range of this channel. Determined by the $PnR field from the first FCS file.

New experimental conditions do not have voltage or range metadata, obviously. Instead, they have experiment set to True, to distinguish the experimental variables from the conditions that were added by gates, etc.

If ignore_v is set, it is added as a key to the Experiment-wide metadata.

Return type

Experiment

clear_estimate()

get_notebook_code(idx)