cytoflowgui.workflow.operations.density¶

class cytoflowgui.workflow.operations.density.DensityGateWorkflowOp[source]¶

Bases: cytoflowgui.workflow.operations.operation_base.WorkflowOperation, cytoflow.operations.density.DensityGateOp

default_view(**kwargs)[source]¶

Returns a diagnostic plot of the Gaussian mixture model.

Returns: a diagnostic view, call DensityGateView.plot to see the diagnostic plot.
Return type: IView

clear_estimate()[source]¶

apply(experiment)[source]¶

Creates a new condition based on membership in the gate that was parameterized with estimate.

Parameters: experiment (Experiment) – the Experiment to apply the gate to.
Returns: a new Experiment with the new gate applied.
Return type: Experiment

get_notebook_code(idx)[source]¶

class cytoflowgui.workflow.operations.density.DensityGateWorkflowView[source]¶

Bases: cytoflowgui.workflow.views.view_base.WorkflowByView, cytoflow.operations.density.DensityGateView

should_plot(changed, payload)[source]¶

Should the owning WorkflowItem refresh the plot when certain things change? changed can be: - Changed.VIEW – the view’s parameters changed - Changed.RESULT – this WorkflowItem’s result changed - Changed.PREV_RESULT – the previous WorkflowItem’s result changed - Changed.ESTIMATE_RESULT – the results of calling “estimate” changed

If should_plot is called from a notification handler, the payload is the handler event parameter.

get_notebook_code(idx)[source]¶