cytoflowgui.view_plugins.parallel_coords

Plots a parallel coordinates plot. PC plots are good for multivariate data; each vertical line represents one attribute, and one set of connected line segments represents one data point.

Channels

The channels to plot, and their scales. Drag the blue dot to re-order.

Add Channel, Remove Channel

Add or remove a channel

Horizonal Facet

Make multiple plots. Each column has a unique value of this variable.

Vertical Facet

Make multiple plots. Each row has a unique value of this variable.

Color Facet

Plot different values of a condition with different colors.

Color Scale

Scale the color palette and the color bar

Tab Facet

Make multiple plots in differen tabs; each tab’s plot has a unique value of this variable.

Subset

Plot only a subset of the data in the experiment.

../../_images/cytoflowgui-view_plugins-parallel_coords-1.png
class cytoflowgui.view_plugins.parallel_coords.ParallelCoordinatesParamsHandler(*args: Any, **kwargs: Any)[source]

Bases: traitsui.api.

class cytoflowgui.view_plugins.parallel_coords.ChannelHandler(*args: Any, **kwargs: Any)[source]

Bases: traitsui.api.

class cytoflowgui.view_plugins.parallel_coords.ParallelCoordinatesHandler(*args: Any, **kwargs: Any)[source]

Bases: traitsui.api.

add_channel

alias of traits.trait_types.Event

remove_channel

alias of traits.trait_types.Event

channels = <traits.traits.ForwardProperty object>
class cytoflowgui.view_plugins.parallel_coords.ParallelCoordinatesPlugin[source]

Bases: envisage.plugin.Plugin, cytoflowgui.view_plugins.view_plugin_base.PluginHelpMixin

view_id = 'edu.mit.synbio.cytoflow.view.parallel_coords'
short_name = 'Parallel Coordinates Plot'
get_view()[source]
get_handler(model, context)[source]
get_icon()[source]